Problem_decl.hpp

#ifndef PROBLEM_DECL_hpp
#define PROBLEM_DECL_hpp
 
#include "feddlib/problems/problems_config.h"
#include "feddlib/core/FEDDCore.hpp"
#include "feddlib/core/FE/FE.hpp"
#include "feddlib/core/FE/Domain.hpp"
#include "feddlib/core/General/BCBuilder.hpp"
#include "feddlib/core/General/DefaultTypeDefs.hpp"
#include "feddlib/problems/Solver/Preconditioner.hpp"
#include "feddlib/core/LinearAlgebra/BlockMultiVector.hpp"
#include "feddlib/core/LinearAlgebra/BlockMatrix.hpp"
#include "feddlib/problems/Solver/LinearSolver.hpp"
 
#include <Stratimikos_DefaultLinearSolverBuilder.hpp>
#include <Thyra_PreconditionerBase.hpp>
#include <Thyra_LinearOpBase_decl.hpp>
 
#include "git_version.h"
 
#ifdef FEDD_HAVE_TEKO
#include <Teko_StratimikosFactory.hpp>
#endif

 
 
namespace FEDD {
template<class SC_, class LO_, class GO_, class NO_>
class Preconditioner;
 
template <class SC = default_sc, class LO = default_lo, class GO = default_go, class NO = default_no>
class Problem {
 
public:
 
    typedef Domain<SC,LO,GO,NO> Domain_Type;
    typedef Teuchos::RCP<Domain_Type> DomainPtr_Type;
    typedef Teuchos::RCP<const Domain_Type> DomainConstPtr_Type;
    typedef std::vector<DomainConstPtr_Type> DomainConstPtr_vec_Type;
 
    typedef Matrix<SC,LO,GO,NO> Matrix_Type;
    typedef Teuchos::RCP<Matrix_Type> MatrixPtr_Type;
 
    typedef typename Matrix_Type::Map_Type Map_Type;
    typedef typename Matrix_Type::MapPtr_Type MapPtr_Type;
    typedef typename Matrix_Type::MapConstPtr_Type MapConstPtr_Type;
 
    typedef BlockMatrix<SC,LO,GO,NO> BlockMatrix_Type;
    typedef Teuchos::RCP<BlockMatrix_Type> BlockMatrixPtr_Type;
    typedef Teuchos::RCP<const BlockMatrix_Type> BlockMatrixConstPtr_Type;
 
    typedef MultiVector<SC,LO,GO,NO> MultiVector_Type;
    typedef Teuchos::RCP<MultiVector_Type> MultiVectorPtr_Type;
    typedef Teuchos::RCP<const MultiVector_Type> MultiVectorConstPtr_Type;
 
    typedef BlockMultiVector<SC,LO,GO,NO> BlockMultiVector_Type;
    typedef Teuchos::RCP<BlockMultiVector_Type> BlockMultiVectorPtr_Type;
    typedef Teuchos::RCP<const BlockMultiVector_Type> BlockMultiVectorConstPtr_Type;
    
    typedef Preconditioner<SC,LO,GO,NO> Preconditioner_Type;
    typedef Teuchos::RCP<Preconditioner_Type> PreconditionerPtr_Type;
    typedef Teuchos::RCP<const Preconditioner_Type> PreconditionerConstPtr_Type;
 
    typedef BCBuilder<SC,LO,GO,NO> BC_Type;
    typedef Teuchos::RCP<BC_Type> BCPtr_Type;
    typedef Teuchos::RCP<const BC_Type> BCConstPtr_Type;
 
    typedef FE<SC,LO,GO,NO> FEFac_Type;
    typedef Teuchos::RCP<FEFac_Type> FEFacPtr_Type;
    typedef Teuchos::RCP<const FEFac_Type> FEFacConstPtr_Type;
 
    typedef Teuchos::ParameterList ParameterList_Type;
    typedef Teuchos::RCP<ParameterList_Type> ParameterListPtr_Type;
 
    typedef Teuchos::RCP<Stratimikos::DefaultLinearSolverBuilder >  LinSolverBuilderPtr_Type;
    typedef Teuchos::RCP<const Stratimikos::DefaultLinearSolverBuilder >  LinSolverBuilderConstPtr_Type;
 
    typedef Teuchos::Comm<int> Comm_Type;
    typedef Teuchos::RCP<const Comm_Type> CommConstPtr_Type;
 
    typedef Teuchos::ArrayRCP<GO> GOVecPtr;
 
    typedef std::vector<std::string> string_vec_Type;
 
    typedef Teuchos::RCP<Thyra::PreconditionerBase<SC> > ThyraPrecPtr_Type;
    typedef Teuchos::RCP<Thyra::LinearOpBase<SC> > ThyraLinOpPtr_Type;
    
    Problem(CommConstPtr_Type comm);
 
    Problem(ParameterListPtr_Type &parameterList, CommConstPtr_Type comm);
 
    virtual ~Problem() = default;
 
    virtual void info() = 0;
 
    void infoProblem();
 
    void infoParameter();
 
    void addVariable(const DomainConstPtr_Type &domain, std::string FEType, std::string name, int dofsPerNode);

    void addRhsFunction(RhsFunc_Type func);

    void addRhsFunction(RhsFunc_Type func,int i);

   // void addRhsFunctionAndFlag(RhsFunc_Type func, int i, int flag);    
 
    RhsFunc_Type& getRhsFunction( int i );
 
    virtual void assemble( std::string type ) const = 0;
    
//    virtual void assembleExternal( std::string type ) = 0;
 
    //void reAssemble();
    
    void assembleSourceTerm( double time = 0. ) const;
    
    void assembleVolumeTerm( double time ) const;
    
    void assembleSurfaceTerm( double time ) const;
    
    bool hasSourceTerm() const;
 
    int solve( BlockMultiVectorPtr_Type rhs = Teuchos::null );
 
    void setupPreconditioner( std::string type="Monolithic" ) const;
 
    void initializePreconditioner( std::string type="Monolithic" ) const;
 
    void addBoundaries(const BCConstPtr_Type &bcFactory);
 
    void setBoundaries(double time=.0) const;
 
    void setBoundariesRHS(double time=.0) const;
    
    void setAllDirichletZero( BlockMultiVectorPtr_Type rhs) const;
    
    void setBoundariesSystem() const;
 
    void initializeProblem(int nmbVectors=1);
    
    void initializeVectors(int nmbVectors=1);
 
    BlockMultiVectorPtr_Type getRhs();
 
    BlockMultiVectorPtr_Type getRhs() const;
 
    BlockMultiVectorPtr_Type getSolution();
 
    BlockMatrixPtr_Type getSystem() const;
 
    PreconditionerPtr_Type getPreconditioner();
 
    PreconditionerConstPtr_Type getPreconditionerConst() const;
 
    void setPreconditionerThyraFromLinOp( ThyraLinOpPtr_Type precLinOp );
    
    void initializeSolverBuilder() const;
 
    bool getVerbose() const;
 
    FEFacConstPtr_Type getFEFactory();
 
    BCConstPtr_Type getBCFactory();
 
    DomainConstPtr_Type getDomain(int i) const;
 
    DomainConstPtr_vec_Type getDomainVector() const{
        return domainPtr_vec_;
    }
    
    std::string getFEType(int i) const;
 
    std::string getVariableName(int i) const;
 
    int getDofsPerNode(int i) const;
 
    ParameterListPtr_Type getParameterList() const;
 
    void addToRhs(BlockMultiVectorPtr_Type x) const;
    
    BlockMultiVectorPtr_Type getSourceTerm();
 
    void initSolutionWithVector(MultiVector_Type& mv);
 
    LinSolverBuilderPtr_Type getLinearSolverBuilder() const{return linearSolverBuilder_;}
 
    CommConstPtr_Type getComm() const{return comm_;}
 
    virtual void getValuesOfInterest( vec_dbl_Type& values ) = 0 ;
 
    virtual void computeValuesOfInterestAndExport() = 0;
    
    void addParemeterRhs(double para){ parasSourceFunc_.push_back( para ); }
    
 
    double calculateH1Norm(MultiVectorConstPtr_Type mv, int blockId1=0, int blockId2=0, int domainInd=0); // Function that calculates H1 Error in the 'mv * K * mv' sense, with K beeing the Stiffness Matrix
 
    double calculateL2Norm(MultiVectorConstPtr_Type mv, int domainInd=0); // Function that calculates L2 Error in the 'mv * M * mv' sense, with M beeing the Mass Matrix
 
 
    int dim_;
    mutable CommConstPtr_Type comm_;
    mutable BlockMatrixPtr_Type system_;
    mutable BlockMultiVectorPtr_Type rhs_;
    mutable BlockMultiVectorPtr_Type solution_;
    PreconditionerPtr_Type preconditioner_;
    LinSolverBuilderPtr_Type linearSolverBuilder_;
 
    bool verbose_;
 
    std::vector<RhsFunc_Type>   rhsFuncVec_; // RHS functions of different blocks
    vec_dbl_Type parasSourceFunc_; //
    
protected:
 
    mutable ParameterListPtr_Type   parameterList_;
    mutable DomainConstPtr_vec_Type domainPtr_vec_;
    string_vec_Type                 domain_FEType_vec_;
    string_vec_Type                 variableName_vec_;
    mutable BCConstPtr_Type         bcFactory_;
 
    FEFacPtr_Type feFactory_;
    std::vector<int> dofsPerNode_vec_;
    
    BlockMultiVectorPtr_Type    sourceTerm_; // BlockMV of all assembled RHS functions
    
#ifdef FEDD_TIMER
    TimePtr_Type solveProblemTimer_;
    TimePtr_Type bcMatrixTimer_;
    TimePtr_Type bcRHSTimer_;
#endif
 
 
 
};
}
#endif